{
  "_id": "6a10473bacfb0bcc41c9ee7c",
  "Package": "soiltestcorr",
  "Title": "Soil Test Correlation and Calibration",
  "Version": "2.2.1",
  "Date": "2024-06-30",
  "Authors@R": "c(\nperson(given = \"Adrian A.\", family = \"Correndo\",\nemail = \"acorrend@uoguelph.ca\", role = c(\"aut\", \"cre\", \"cph\"),comment = c(ORCID = \"0000-0002-4172-289X\")),\nperson(given = \"Austin\", family = \"Pearce\",\nemail = \"awpearc2@ncsu.edu\", role = \"aut\",comment = c(ORCID = \"0000-0002-2541-896X\")),\nperson(given = \"Fernando\", family = \"Miguez\",\nemail = \"femiguez@iastate.edu\", role = \"ctb\",comment = c(ORCID = \"0000-0002-4627-8329\")),\nperson(given = \"Deanna\", family = \"Osmond\",\nemail = \"deanna_osmond@ncsu.edu\", role = \"aut\",comment = c(ORCID = \"0000-0002-6336-8318\")),\nperson(\"Ignacio A.\", \"Ciampitti\", email = \"ciampitti@ksu.edu\", role = c(\"aut\"), comment = c(ORCID = \"0000-0001-9619-5129\")) )",
  "Description": "A compilation of functions designed to assist users on the\ncorrelation analysis of crop yield and soil test values.\nFunctions to estimate crop response patterns to soil nutrient\navailability and critical soil test values using various\napproaches such as: 1) the modified arcsine-log calibration\ncurve (Correndo et al. (2017) <doi:10.1071/CP16444>); 2) the\ngraphical Cate-Nelson quadrants analysis (Cate & Nelson\n(1965)), 3) the statistical Cate-Nelson quadrants analysis\n(Cate & Nelson (1971)\n<doi:10.2136/sssaj1971.03615995003500040048x>), 4) the\nlinear-plateau regression (Anderson & Nelson (1975)\n<doi:10.2307/2529422>), 5) the quadratic-plateau regression\n(Bullock & Bullock (1994)\n<doi:10.2134/agronj1994.00021962008600010033x>), and 6) the\nMitscherlich-type exponential regression (Melsted & Peck (1977)\n<doi:10.2134/asaspecpub29.c1>). The package development stemmed\nfrom ongoing work with the Fertilizer Recommendation Support\nTool (FRST) and Feed the Future Innovation Lab for\nCollaborative Research on Sustainable Intensification (SIIL)\nprojects.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.2",
  "LazyData": "true",
  "VignetteBuilder": "knitr",
  "URL": "https://adriancorrendo.github.io/soiltestcorr/,\nhttps://soiltestfrst.org/,\nhttps://www.siildigitalagconsortium.com/",
  "BugReports": "https://github.com/adriancorrendo/soiltestcorr/issues",
  "Config/pak/sysreqs": "make libicu-dev",
  "Repository": "https://adriancorrendo.r-universe.dev",
  "Date/Publication": "2024-06-30 15:18:31 UTC",
  "RemoteUrl": "https://github.com/adriancorrendo/soiltestcorr",
  "RemoteRef": "HEAD",
  "RemoteSha": "a4e6ffbf53be0565409bbf8d498ad5dab9dde8f7",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-10 09:46:57 UTC",
    "User": "root"
  },
  "Author": "Adrian A. Correndo [aut, cre, cph] (ORCID:\n<https://orcid.org/0000-0002-4172-289X>),\nAustin Pearce [aut] (ORCID: <https://orcid.org/0000-0002-2541-896X>),\nFernando Miguez [ctb] (ORCID: <https://orcid.org/0000-0002-4627-8329>),\nDeanna Osmond [aut] (ORCID: <https://orcid.org/0000-0002-6336-8318>),\nIgnacio A. Ciampitti [aut] (ORCID:\n<https://orcid.org/0000-0001-9619-5129>)",
  "Maintainer": "Adrian A. Correndo <acorrend@uoguelph.ca>",
  "MD5sum": "f52e7f917227893017912e6f20a70600",
  "_user": "adriancorrendo",
  "_type": "src",
  "_file": "soiltestcorr_2.2.1.tar.gz",
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  "_sha256": "edb6f5e979527968e804bb2739da7ca80a94d94dbc5b77348b45aae82a34dde5",
  "_created": "2026-05-10T09:46:57.000Z",
  "_published": "2026-05-22T12:08:27.138Z",
  "_distro": "noble",
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  "_buildurl": "https://github.com/r-universe/adriancorrendo/actions/runs/25625422215",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/adriancorrendo/soiltestcorr",
  "_commit": {
    "id": "a4e6ffbf53be0565409bbf8d498ad5dab9dde8f7",
    "author": "adriancorrendo <acorrend@uoguelph.ca>",
    "committer": "adriancorrendo <acorrend@uoguelph.ca>",
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  "_maintainer": {
    "name": "Adrian A. Correndo",
    "email": "acorrend@uoguelph.ca",
    "login": "adriancorrendo",
    "linkedin": "in/adriancorrendo",
    "twitter": "@aacorrendo",
    "uuid": 46946511,
    "orcid": "0000-0002-4172-289X"
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  "_dependencies": [
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  "_owner": "adriancorrendo",
  "_selfowned": true,
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  "_updates": [],
  "_tags": [],
  "_stars": 8,
  "_contributors": [
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  "_userbio": {
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    "type": "user",
    "name": "Adrian A. Correndo",
    "description": "Assistant Professor\r\nSustainable Cropping Systems,\r\nAdvocate of Applied Stats & Programming for Agriculture."
  },
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  "_pkgdown": "https://adriancorrendo.github.io/soiltestcorr/",
  "_searchresults": 31,
  "_rbuild": "4.6.0",
  "_assets": [
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    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
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    "extra/readme.md",
    "extra/soiltestcorr.html",
    "manual.pdf"
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  "_homeurl": "https://github.com/adriancorrendo/soiltestcorr",
  "_realowner": "adriancorrendo",
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      "version": "2.1.1",
      "date": "2022-05-11"
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      "version": "2.1.2",
      "date": "2022-06-12"
    },
    {
      "version": "2.2.0",
      "date": "2023-04-07"
    },
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      "version": "2.2.1",
      "date": "2024-07-01"
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  ],
  "_exports": [
    "boot_cn_1965",
    "boot_cn_1971",
    "boot_linear_plateau",
    "boot_mitscherlich",
    "boot_mod_alcc",
    "boot_quadratic_plateau",
    "cate_nelson_1965",
    "cate_nelson_1971",
    "linear_plateau",
    "logLik_alcc",
    "mits_formula_1",
    "mits_formula_2",
    "mits_formula_3",
    "mitscherlich",
    "mod_alcc",
    "quadratic_plateau",
    "SS_LP",
    "SS_QP"
  ],
  "_datasets": [
    {
      "name": "data_test",
      "title": "Dataset 1",
      "object": "data_test",
      "class": [
        "data.table",
        "data.frame"
      ],
      "fields": [
        "STV",
        "RY"
      ],
      "rows": 137,
      "table": true,
      "tojson": true
    },
    {
      "name": "freitas1966",
      "title": "Dataset 2",
      "object": "freitas1966",
      "class": [
        "data.table",
        "data.frame"
      ],
      "fields": [
        "STK",
        "RY"
      ],
      "rows": 24,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "cate_nelson_1965",
      "title": "Cate & Nelson quadrants analysis (graphical)",
      "topics": [
        "boot_cn_1965",
        "cate_nelson_1965"
      ]
    },
    {
      "page": "cate_nelson_1971",
      "title": "Cate & Nelson quadrants analysis (statistical)",
      "topics": [
        "boot_cn_1971",
        "cate_nelson_1971"
      ]
    },
    {
      "page": "data_test",
      "title": "Dataset 1",
      "topics": [
        "data_test"
      ]
    },
    {
      "page": "freitas1966",
      "title": "Dataset 2",
      "topics": [
        "freitas1966"
      ]
    },
    {
      "page": "linear_plateau",
      "title": "Linear-plateau response function",
      "topics": [
        "boot_linear_plateau",
        "linear_plateau",
        "SS_LP"
      ]
    },
    {
      "page": "mitscherlich",
      "title": "Mitscherlich response function",
      "topics": [
        "boot_mitscherlich",
        "mitscherlich",
        "mits_formula_1",
        "mits_formula_2",
        "mits_formula_3"
      ]
    },
    {
      "page": "mod_alcc",
      "title": "Modified Arcsine-Log Calibration Curve",
      "topics": [
        "boot_mod_alcc",
        "logLik_alcc",
        "mod_alcc"
      ]
    },
    {
      "page": "quadratic_plateau",
      "title": "Quadratic-plateau response function",
      "topics": [
        "boot_quadratic_plateau",
        "quadratic_plateau",
        "SS_QP"
      ]
    }
  ],
  "_readme": "https://github.com/adriancorrendo/soiltestcorr/raw/HEAD/README.md",
  "_rundeps": [
    "AICcmodavg",
    "backports",
    "boot",
    "broom",
    "cli",
    "cpp11",
    "data.table",
    "dplyr",
    "evaluate",
    "farver",
    "generics",
    "ggplot2",
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    "lattice",
    "lifecycle",
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    "nlstools",
    "pillar",
    "pkgconfig",
    "polynom",
    "purrr",
    "R6",
    "rbibutils",
    "RColorBrewer",
    "Rcpp",
    "RcppArmadillo",
    "RcppEigen",
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    "rlang",
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    "scales",
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    "tidyr",
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    "VGAM",
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    "xfun",
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    "xts",
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    "zoo"
  ],
  "_vignettes": [
    {
      "source": "bootstrapping_tutorial.Rmd",
      "filename": "bootstrapping_tutorial.html",
      "title": "Bootstrapping",
      "author": "Adrian Correndo, Austin Pearce",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Description",
        "What is bootstrapping?",
        "How does it work?",
        "The soiltestcorr::boot_() functions",
        "Examples",
        "Data",
        "1. boot_cn_1965()",
        "2. boot_cn_1971()",
        "3. boot_mod_alcc()",
        "2. boot_linear_plateau()",
        "3. boot_quadratic_plateau()",
        "4. boot_mitscherlich()",
        "set.seed()",
        "References",
        "Additional webpages on bootstrapping in R"
      ],
      "created": "2023-04-05 05:30:35",
      "modified": "2023-04-11 19:08:18",
      "commits": 10
    },
    {
      "source": "cate_nelson_1965_tutorial.Rmd",
      "filename": "cate_nelson_1965_tutorial.html",
      "title": "Cate and Nelson (1965)",
      "author": "Adrian Correndo",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Description <br/>",
        "General Instructions <br/>",
        "Tutorial",
        "Load datasets",
        "Fit cate_nelson_1965()",
        "1. Individual fits <br/>",
        "1.1. tidy = FALSE <br/>",
        "1.2. tidy = TRUE <br/>",
        "1.3. Alternative using the vectors <br/>",
        "1.4. Data 2. Test dataset <br/>",
        "1.5. Data 3. Freitas et al. 1966 <br/>",
        "2. Multiple fits at once <br/>",
        "2.1. Using map",
        "Create nested data <br/>",
        "Fit",
        "2.2. Using group_map <br/>",
        "3. Bootstrapping <br/>",
        "4. Plots",
        "4.1. Calibration Curve"
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      "modified": "2023-04-11 19:08:18",
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      "filename": "cate_nelson_1971_tutorial.html",
      "title": "Cate and Nelson (1971)",
      "author": "Adrian Correndo",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Description",
        "General Instructions <br/>",
        "Tutorial",
        "Load datasets",
        "Fit cate_nelson_1971()",
        "1. Individual fits <br/>",
        "1.1. tidy = FALSE <br/>",
        "1.2. tidy = TRUE <br/>",
        "1.3. Alternative using the vectors <br/>",
        "1.4. Data 2. Test dataset <br/>",
        "1.5. Data 3. Freitas et al. 1966 <br/>",
        "2. Multiple fits at once <br/>",
        "2.1. Using map",
        "Create nested data <br/>",
        "Fit",
        "2.2. Using group_map <br/>",
        "3. Bootstrapping <br/>",
        "4. Plots",
        "4.1. Calibration Curve"
      ],
      "created": "2022-04-28 18:54:37",
      "modified": "2023-04-11 19:08:18",
      "commits": 13
    },
    {
      "source": "Introduction_to_soiltestcorr.Rmd",
      "filename": "Introduction_to_soiltestcorr.html",
      "title": "Introduction",
      "author": "Adrian Correndo & Austin Pearce",
      "engine": "knitr::rmarkdown",
      "headings": [
        "1. Installation",
        "2. Available models in soiltestcorr: <br/>",
        "2.1. Modified Arcsine-Log Calibration Curve <br/>",
        "2.2. Cate & Nelson (1965) <br/>",
        "2.3. Cate & Nelson (1971) <br/>",
        "2.4. Linear-plateau <br/>",
        "2.5. Quadratic-plateau <br/>",
        "2.6. Mitscherlich <br/>",
        "3. Publication in SoftwareX Journal: <br/>",
        "4. Shinyapp: <br/>"
      ],
      "created": "2022-04-15 13:13:16",
      "modified": "2023-04-11 19:08:18",
      "commits": 16
    },
    {
      "source": "linear_plateau_tutorial.Rmd",
      "filename": "linear_plateau_tutorial.html",
      "title": "Linear-plateau response",
      "author": "Adrian Correndo & Austin Pearce",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Description",
        "General Instructions",
        "Tutorial",
        "Load dataset",
        "Fit linear_plateau()",
        "1. Individual fits",
        "1.1. tidy = TRUE (default)",
        "1.2. tidy = FALSE",
        "1.3. Alternative using the vectors",
        "2. Multiple fits at once",
        "2.1. Using map()",
        "2.2. Using group_modify()",
        "3. Bootstrapping",
        "4. Plots",
        "4.1. Correlation Curve",
        "4.2. Fine-tune the plots",
        "4.3. Residuals",
        "References"
      ],
      "created": "2022-04-28 18:54:37",
      "modified": "2023-04-11 19:08:18",
      "commits": 19
    },
    {
      "source": "mitscherlich_tutorial.Rmd",
      "filename": "mitscherlich_tutorial.html",
      "title": "Mitscherlich-type response",
      "author": "Adrian Correndo & Austin Pearce",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Description",
        "General Instructions",
        "Tutorial",
        "Load datasets",
        "Fit mitscherlich()",
        "1. Individual fits",
        "1.1. Different number of parameters type = #",
        "1.2. tidy = FALSE",
        "1.3. Alternative using the data frame vectors",
        "2. Multiple fits at once",
        "2.1. Using map()",
        "2.2. Using group_modify()",
        "3. Bootstrapping",
        "4. Plots",
        "4.1. Calibration Curve",
        "4.2 Fine-tune the plots",
        "4.3. Residuals",
        "References"
      ],
      "created": "2022-05-02 06:11:05",
      "modified": "2023-04-11 19:08:18",
      "commits": 25
    },
    {
      "source": "mod_alcc_tutorial.Rmd",
      "filename": "mod_alcc_tutorial.html",
      "title": "Modified ALCC",
      "author": "Adrian Correndo",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Description",
        "General Instructions",
        "Tutorial",
        "Load datasets",
        "Fit mod_alcc()",
        "1. Individual fits",
        "1.1. tidy = FALSE",
        "1.2. tidy = TRUE",
        "1.3. Alternative using the vectors",
        "2. Multiple fits at once",
        "2.1. Using map()",
        "2.2. Using group_modify()",
        "3. Bootstrapping",
        "4. Plots",
        "4.1. Calibration Curve",
        "4.2. Fine-tune the plots",
        "3.2. SMA regression",
        "3.3. SMA residuals",
        "References"
      ],
      "created": "2022-04-28 18:54:37",
      "modified": "2023-04-11 19:08:18",
      "commits": 17
    },
    {
      "source": "quadratic_plateau_tutorial.Rmd",
      "filename": "quadratic_plateau_tutorial.html",
      "title": "Quadratic-plateau response",
      "author": "Adrian Correndo & Austin Pearce",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Description",
        "General Instructions",
        "Tutorial",
        "Load dataset",
        "Fit quadratic_plateau()",
        "1. Individual fits",
        "1.1. tidy = TRUE (default)",
        "1.2. tidy = FALSE",
        "1.3. Alternative using the vectors",
        "2. Multiple fits at once",
        "2.1. Using map()",
        "2.2. Using group_modify()",
        "3. Bootstrapping",
        "4. Plots",
        "4.1. Correlation Curve",
        "4.2. Fine-tune the plots",
        "4.3. Residuals",
        "References"
      ],
      "created": "2022-04-28 18:54:37",
      "modified": "2023-04-11 19:08:18",
      "commits": 17
    },
    {
      "source": "Shinyapp.Rmd",
      "filename": "Shinyapp.html",
      "title": "Shinyapp",
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