Package: soiltestcorr 2.2.1

soiltestcorr: Soil Test Correlation and Calibration

A compilation of functions designed to assist users on the correlation analysis of crop yield and soil test values. Functions to estimate crop response patterns to soil nutrient availability and critical soil test values using various approaches such as: 1) the modified arcsine-log calibration curve (Correndo et al. (2017) <doi:10.1071/CP16444>); 2) the graphical Cate-Nelson quadrants analysis (Cate & Nelson (1965)), 3) the statistical Cate-Nelson quadrants analysis (Cate & Nelson (1971) <doi:10.2136/sssaj1971.03615995003500040048x>), 4) the linear-plateau regression (Anderson & Nelson (1975) <doi:10.2307/2529422>), 5) the quadratic-plateau regression (Bullock & Bullock (1994) <doi:10.2134/agronj1994.00021962008600010033x>), and 6) the Mitscherlich-type exponential regression (Melsted & Peck (1977) <doi:10.2134/asaspecpub29.c1>). The package development stemmed from ongoing work with the Fertilizer Recommendation Support Tool (FRST) and Feed the Future Innovation Lab for Collaborative Research on Sustainable Intensification (SIIL) projects.

Authors:Adrian A. Correndo [aut, cre, cph], Austin Pearce [aut], Fernando Miguez [ctb], Deanna Osmond [aut], Ignacio A. Ciampitti [aut]

soiltestcorr_2.2.1.tar.gz
soiltestcorr_2.2.1.zip(r-4.5)soiltestcorr_2.2.1.zip(r-4.4)soiltestcorr_2.2.1.zip(r-4.3)
soiltestcorr_2.2.1.tgz(r-4.4-any)soiltestcorr_2.2.1.tgz(r-4.3-any)
soiltestcorr_2.2.1.tar.gz(r-4.5-noble)soiltestcorr_2.2.1.tar.gz(r-4.4-noble)
soiltestcorr_2.2.1.tgz(r-4.4-emscripten)soiltestcorr_2.2.1.tgz(r-4.3-emscripten)
soiltestcorr.pdf |soiltestcorr.html
soiltestcorr/json (API)
NEWS

# Install 'soiltestcorr' in R:
install.packages('soiltestcorr', repos = c('https://adriancorrendo.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/adriancorrendo/soiltestcorr/issues

Datasets:

On CRAN:

5.94 score 7 stars 25 scripts 295 downloads 18 exports 69 dependencies

Last updated 5 months agofrom:a4e6ffbf53. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 28 2024
R-4.5-winOKOct 28 2024
R-4.5-linuxOKOct 28 2024
R-4.4-winOKOct 28 2024
R-4.4-macOKOct 28 2024
R-4.3-winOKOct 28 2024
R-4.3-macOKOct 28 2024

Exports:boot_cn_1965boot_cn_1971boot_linear_plateauboot_mitscherlichboot_mod_alccboot_quadratic_plateaucate_nelson_1965cate_nelson_1971linear_plateaulogLik_alccmits_formula_1mits_formula_2mits_formula_3mitscherlichmod_alccquadratic_plateauSS_LPSS_QP

Dependencies:AICcmodavgbackportsbootbroomclicolorspacecpp11data.tabledplyrevaluatefansifarvergenericsggplot2ggppgluegridExtragtablehighrisobandknitrlabelinglatticelifecyclelme4lubridatemagrittrMASSMatrixmgcvminpack.lmminqamodelrmunsellnlmenloptrnlraanlstoolspillarpkgconfigpolynompurrrR6RColorBrewerRcppRcppArmadilloRcppEigenrlangscalessmatrstringistringrsurvivaltibbletidyrtidyselecttimechangeTMBunmarkedutf8vctrsVGAMviridisLitewithrxfunxtablextsyamlzoo

Bootstrapping

Rendered frombootstrapping_tutorial.Rmdusingknitr::rmarkdownon Oct 28 2024.

Last update: 2023-04-11
Started: 2023-04-05

Cate and Nelson (1965)

Rendered fromcate_nelson_1965_tutorial.Rmdusingknitr::rmarkdownon Oct 28 2024.

Last update: 2023-04-11
Started: 2022-04-28

Cate and Nelson (1971)

Rendered fromcate_nelson_1971_tutorial.Rmdusingknitr::rmarkdownon Oct 28 2024.

Last update: 2023-04-11
Started: 2022-04-28

Introduction

Rendered fromIntroduction_to_soiltestcorr.Rmdusingknitr::rmarkdownon Oct 28 2024.

Last update: 2023-04-11
Started: 2022-04-15

Linear-plateau response

Rendered fromlinear_plateau_tutorial.Rmdusingknitr::rmarkdownon Oct 28 2024.

Last update: 2023-04-11
Started: 2022-04-28

Mitscherlich-type response

Rendered frommitscherlich_tutorial.Rmdusingknitr::rmarkdownon Oct 28 2024.

Last update: 2023-04-11
Started: 2022-05-02

Modified ALCC

Rendered frommod_alcc_tutorial.Rmdusingknitr::rmarkdownon Oct 28 2024.

Last update: 2023-04-11
Started: 2022-04-28

Quadratic-plateau response

Rendered fromquadratic_plateau_tutorial.Rmdusingknitr::rmarkdownon Oct 28 2024.

Last update: 2023-04-11
Started: 2022-04-28

Shinyapp

Rendered fromShinyapp.Rmdusingknitr::rmarkdownon Oct 28 2024.

Last update: 2023-04-11
Started: 2023-03-08

SoftwareX publication

Rendered fromSoftwareX_publication.Rmdusingknitr::rmarkdownon Oct 28 2024.

Last update: 2023-04-11
Started: 2023-03-08

Readme and manuals

Help Manual

Help pageTopics
Cate & Nelson quadrants analysis (graphical)boot_cn_1965 cate_nelson_1965
Cate & Nelson quadrants analysis (statistical)boot_cn_1971 cate_nelson_1971
Dataset 1data_test
Dataset 2freitas1966
Linear-plateau response functionboot_linear_plateau linear_plateau SS_LP
Mitscherlich response functionboot_mitscherlich mitscherlich mits_formula_1 mits_formula_2 mits_formula_3
Modified Arcsine-Log Calibration Curveboot_mod_alcc logLik_alcc mod_alcc
Quadratic-plateau response functionboot_quadratic_plateau quadratic_plateau SS_QP